PoplarV1, Main, Exploration, bibRecord, 001C27

Nesterenkonia populi sp. nov., an actinobacterium isolated from Populus euphratica.

Identifieur interne : 001C27 ( Main/Exploration ); précédent : 001C26; suivant : 001C28

Nesterenkonia populi sp. nov., an actinobacterium isolated from Populus euphratica.

Auteurs : Jia-Meng Liu [République populaire de Chine] ; Li Tuo [République populaire de Chine] ; Xugela Habden [République populaire de Chine] ; Lin Guo [République populaire de Chine] ; Zhong-Ke Jiang [République populaire de Chine] ; Xian-Fu Liu [République populaire de Chine] ; Li Chen [République populaire de Chine] ; Yu-Qin Zhang [République populaire de Chine] ; Cheng-Hang Sun [République populaire de Chine]

Source :

International journal of systematic and evolutionary microbiology [ 1466-5034 ] ; 2015.

RBID : pubmed:25701851

Descripteurs français

KwdFr :
- ADN bactérien (génétique), ARN ribosomique 16S (génétique), Acides gras (composition chimique), Analyse de séquence d'ADN (MeSH), Chine (MeSH), Composition en bases nucléiques (MeSH), Données de séquences moléculaires (MeSH), Hybridation d'acides nucléiques (MeSH), Micrococcaceae (classification), Micrococcaceae (génétique), Micrococcaceae (isolement et purification), Peptidoglycane (composition chimique), Phospholipides (composition chimique), Phylogenèse (MeSH), Populus (microbiologie), Techniques de typage bactérien (MeSH), Vitamine K2 (composition chimique), Écorce (microbiologie).
MESH :
- composition chimique : Acides gras, Micrococcaceae, Peptidoglycane, Phospholipides, Vitamine K2.
- génétique : ADN bactérien, ARN ribosomique 16S, Micrococcaceae.
- isolement et purification : Micrococcaceae.
- microbiologie : Populus, Écorce.
- Analyse de séquence d'ADN, Chine, Composition en bases nucléiques, Données de séquences moléculaires, Hybridation d'acides nucléiques, Phylogenèse, Techniques de typage bactérien.

English descriptors

KwdEn :
- Bacterial Typing Techniques (MeSH), Base Composition (MeSH), China (MeSH), DNA, Bacterial (genetics), Fatty Acids (chemistry), Micrococcaceae (classification), Micrococcaceae (genetics), Micrococcaceae (isolation & purification), Molecular Sequence Data (MeSH), Nucleic Acid Hybridization (MeSH), Peptidoglycan (chemistry), Phospholipids (chemistry), Phylogeny (MeSH), Plant Bark (microbiology), Populus (microbiology), RNA, Ribosomal, 16S (genetics), Sequence Analysis, DNA (MeSH), Vitamin K 2 (chemistry).
MESH :
- chemical , chemistry : Fatty Acids, Peptidoglycan, Phospholipids, Vitamin K 2.
- chemical , genetics : DNA, Bacterial, RNA, Ribosomal, 16S.
- classification : Micrococcaceae.
- genetics : Micrococcaceae.
- isolation & purification : Micrococcaceae.
- microbiology : Plant Bark, Populus.
- Bacterial Typing Techniques, Base Composition, China, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Sequence Analysis, DNA.

Abstract

An alkaliphilic and moderately halophilic actinobacterium, designated strain GP10-3(T), was isolated from Populus euphratica collected from the southern edge of Taklimakan desert, Xinjiang, China. Cells of this strain were Gram-stain-positive, non-motile and non-spore-forming short rods. Strain GP10-3(T) grew optimally at 37 °C on LB agar media in the presence of 5-10% (w/v) NaCl at pH 9.0. The menaquinones were MK-7, MK-8 and MK-9. The major fatty acids (>10%) were anteiso-C17 : 0, anteiso-C15 : 0 and iso-C16 : 0. The peptidoglycan type was variation A4α, L-Lys-L-Glu. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylglycolipid, phosphatidylcholine, phosphatidylinositol, glycolipid and an unidentified phospholipid. The DNA G+C content was 67.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequence showed that strain GP10-3(T) belonged to the genus Nesterenkonia , sharing 94.6-96.9% sequence similarity with the type strains of species within this genus with validly published names. Based on the evidence of the polyphasic taxonomic study, strain GP10-3(T) represents a novel species of the genus Nesterenkonia , for which the name Nesterenkonia populi sp. nov. is proposed. The type strain is GP10-3(T) ( = DSM 27959(T) = KCTC 29119(T)).

DOI: 10.1099/ijs.0.000123
PubMed: 25701851

Affiliations:

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Le document en format XML

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<author><name sortKey="Sun, Cheng Hang" sort="Sun, Cheng Hang" uniqKey="Sun C" first="Cheng-Hang" last="Sun">Cheng-Hang Sun</name>
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<term>Base Composition (MeSH)</term>
<term>China (MeSH)</term>
<term>DNA, Bacterial (genetics)</term>
<term>Fatty Acids (chemistry)</term>
<term>Micrococcaceae (classification)</term>
<term>Micrococcaceae (genetics)</term>
<term>Micrococcaceae (isolation & purification)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Nucleic Acid Hybridization (MeSH)</term>
<term>Peptidoglycan (chemistry)</term>
<term>Phospholipids (chemistry)</term>
<term>Phylogeny (MeSH)</term>
<term>Plant Bark (microbiology)</term>
<term>Populus (microbiology)</term>
<term>RNA, Ribosomal, 16S (genetics)</term>
<term>Sequence Analysis, DNA (MeSH)</term>
<term>Vitamin K 2 (chemistry)</term>
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<keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (génétique)</term>
<term>ARN ribosomique 16S (génétique)</term>
<term>Acides gras (composition chimique)</term>
<term>Analyse de séquence d'ADN (MeSH)</term>
<term>Chine (MeSH)</term>
<term>Composition en bases nucléiques (MeSH)</term>
<term>Données de séquences moléculaires (MeSH)</term>
<term>Hybridation d'acides nucléiques (MeSH)</term>
<term>Micrococcaceae (classification)</term>
<term>Micrococcaceae (génétique)</term>
<term>Micrococcaceae (isolement et purification)</term>
<term>Peptidoglycane (composition chimique)</term>
<term>Phospholipides (composition chimique)</term>
<term>Phylogenèse (MeSH)</term>
<term>Populus (microbiologie)</term>
<term>Techniques de typage bactérien (MeSH)</term>
<term>Vitamine K2 (composition chimique)</term>
<term>Écorce (microbiologie)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Fatty Acids</term>
<term>Peptidoglycan</term>
<term>Phospholipids</term>
<term>Vitamin K 2</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Bacterial</term>
<term>RNA, Ribosomal, 16S</term>
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<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Micrococcaceae</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Acides gras</term>
<term>Micrococcaceae</term>
<term>Peptidoglycane</term>
<term>Phospholipides</term>
<term>Vitamine K2</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Micrococcaceae</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN bactérien</term>
<term>ARN ribosomique 16S</term>
<term>Micrococcaceae</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Micrococcaceae</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Micrococcaceae</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Populus</term>
<term>Écorce</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Bark</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Bacterial Typing Techniques</term>
<term>Base Composition</term>
<term>China</term>
<term>Molecular Sequence Data</term>
<term>Nucleic Acid Hybridization</term>
<term>Phylogeny</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Chine</term>
<term>Composition en bases nucléiques</term>
<term>Données de séquences moléculaires</term>
<term>Hybridation d'acides nucléiques</term>
<term>Phylogenèse</term>
<term>Techniques de typage bactérien</term>
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<front><div type="abstract" xml:lang="en">An alkaliphilic and moderately halophilic actinobacterium, designated strain GP10-3(T), was isolated from Populus euphratica collected from the southern edge of Taklimakan desert, Xinjiang, China. Cells of this strain were Gram-stain-positive, non-motile and non-spore-forming short rods. Strain GP10-3(T) grew optimally at 37 °C on LB agar media in the presence of 5-10% (w/v) NaCl at pH 9.0. The menaquinones were MK-7, MK-8 and MK-9. The major fatty acids (>10%) were anteiso-C17 : 0, anteiso-C15 : 0 and iso-C16 : 0. The peptidoglycan type was variation A4α, L-Lys-L-Glu. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylglycolipid, phosphatidylcholine, phosphatidylinositol, glycolipid and an unidentified phospholipid. The DNA G+C content was 67.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequence showed that strain GP10-3(T) belonged to the genus Nesterenkonia , sharing 94.6-96.9% sequence similarity with the type strains of species within this genus with validly published names. Based on the evidence of the polyphasic taxonomic study, strain GP10-3(T) represents a novel species of the genus Nesterenkonia , for which the name Nesterenkonia populi sp. nov. is proposed. The type strain is GP10-3(T) ( = DSM 27959(T) = KCTC 29119(T)).</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">25701851</PMID>
<DateCompleted><Year>2015</Year>
<Month>10</Month>
<Day>06</Day>
</DateCompleted>
<DateRevised><Year>2020</Year>
<Month>05</Month>
<Day>12</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1466-5034</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>65</Volume>
<Issue>Pt 5</Issue>
<PubDate><Year>2015</Year>
<Month>May</Month>
</PubDate>
</JournalIssue>
<Title>International journal of systematic and evolutionary microbiology</Title>
<ISOAbbreviation>Int J Syst Evol Microbiol</ISOAbbreviation>
</Journal>
<ArticleTitle>Nesterenkonia populi sp. nov., an actinobacterium isolated from Populus euphratica.</ArticleTitle>
<Pagination><MedlinePgn>1474-1479</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1099/ijs.0.000123</ELocationID>
<Abstract><AbstractText>An alkaliphilic and moderately halophilic actinobacterium, designated strain GP10-3(T), was isolated from Populus euphratica collected from the southern edge of Taklimakan desert, Xinjiang, China. Cells of this strain were Gram-stain-positive, non-motile and non-spore-forming short rods. Strain GP10-3(T) grew optimally at 37 °C on LB agar media in the presence of 5-10% (w/v) NaCl at pH 9.0. The menaquinones were MK-7, MK-8 and MK-9. The major fatty acids (>10%) were anteiso-C17 : 0, anteiso-C15 : 0 and iso-C16 : 0. The peptidoglycan type was variation A4α, L-Lys-L-Glu. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylglycolipid, phosphatidylcholine, phosphatidylinositol, glycolipid and an unidentified phospholipid. The DNA G+C content was 67.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequence showed that strain GP10-3(T) belonged to the genus Nesterenkonia , sharing 94.6-96.9% sequence similarity with the type strains of species within this genus with validly published names. Based on the evidence of the polyphasic taxonomic study, strain GP10-3(T) represents a novel species of the genus Nesterenkonia , for which the name Nesterenkonia populi sp. nov. is proposed. The type strain is GP10-3(T) ( = DSM 27959(T) = KCTC 29119(T)).</AbstractText>
<CopyrightInformation>© 2015 IUMS.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Liu</LastName>
<ForeName>Jia-Meng</ForeName>
<Initials>JM</Initials>
<AffiliationInfo><Affiliation>Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, PR China.</Affiliation>
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<Author ValidYN="Y"><LastName>Tuo</LastName>
<ForeName>Li</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, PR China.</Affiliation>
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<AffiliationInfo><Affiliation>College of Life Science and Chemistry, Xinjiang Normal University, Urumchi 830054, PR China.</Affiliation>
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<AffiliationInfo><Affiliation>Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, PR China.</Affiliation>
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<Initials>L</Initials>
<AffiliationInfo><Affiliation>Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, PR China.</Affiliation>
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<Author ValidYN="Y"><LastName>Jiang</LastName>
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<AffiliationInfo><Affiliation>Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Liu</LastName>
<ForeName>Xian-Fu</ForeName>
<Initials>XF</Initials>
<AffiliationInfo><Affiliation>Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Chen</LastName>
<ForeName>Li</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, PR China.</Affiliation>
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<AffiliationInfo><Affiliation>Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, PR China.</Affiliation>
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<Initials>CH</Initials>
<AffiliationInfo><Affiliation>Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, PR China.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName>
<AccessionNumberList><AccessionNumber>KP057085</AccessionNumber>
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<Month>02</Month>
<Day>20</Day>
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<MedlineJournalInfo><Country>England</Country>
<MedlineTA>Int J Syst Evol Microbiol</MedlineTA>
<NlmUniqueID>100899600</NlmUniqueID>
<ISSNLinking>1466-5026</ISSNLinking>
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<Chemical><RegistryNumber>11032-49-8</RegistryNumber>
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<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
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<MeshHeading><DescriptorName UI="D010802" MajorTopicYN="Y">Phylogeny</DescriptorName>
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<MeshHeading><DescriptorName UI="D024301" MajorTopicYN="N">Plant Bark</DescriptorName>
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<MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D024482" MajorTopicYN="N">Vitamin K 2</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
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<PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2015</Year>
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<ArticleIdList><ArticleId IdType="pubmed">25701851</ArticleId>
<ArticleId IdType="doi">10.1099/ijs.0.000123</ArticleId>
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<affiliations><list><country><li>République populaire de Chine</li>
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<settlement><li>Pékin</li>
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<tree><country name="République populaire de Chine"><noRegion><name sortKey="Liu, Jia Meng" sort="Liu, Jia Meng" uniqKey="Liu J" first="Jia-Meng" last="Liu">Jia-Meng Liu</name>
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<name sortKey="Chen, Li" sort="Chen, Li" uniqKey="Chen L" first="Li" last="Chen">Li Chen</name>
<name sortKey="Guo, Lin" sort="Guo, Lin" uniqKey="Guo L" first="Lin" last="Guo">Lin Guo</name>
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<name sortKey="Jiang, Zhong Ke" sort="Jiang, Zhong Ke" uniqKey="Jiang Z" first="Zhong-Ke" last="Jiang">Zhong-Ke Jiang</name>
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Nesterenkonia populi sp. nov., an actinobacterium isolated from Populus euphratica.

Nesterenkonia populi sp. nov., an actinobacterium isolated from Populus euphratica.

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Abstract

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